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Issues during converting the xsd from MS-Access-based to SQL Server-based

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I need convert  the xsd from MS-Access-based to SQL Server-based.

My boss noticed me that in the designer wizard is possibility to change datasources too for more complex dataset .

See attached pictures.

Yes I know when I try it don't work right to me at the first time,

but when I delete dataset designer file and at the solution explorer in the item of given dataset I press run cutom tool I regenerate designer file for given datasets.

Then I made still any operation that I don't remember exactly.

Then all properties and structures in the dataset regenerate right and dataset begin to work properly.

Problem only is that I don't remember all operation exactly and now I can't repeat this situation.

Can you please help mi to advice this exact method that could right regenerate this dataset. 

My boss still demand me that I attached here this snapshot.

At the left side is version of xsd file generated by wizard when I only changed ms-access data sources for sql server data sources.

At the right side of comparison is right working version but created manually. 

Don't exist any method that can too wizard version force to make things properly?

Why these two similar methods give different results?


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